Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx2P48379 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx2P48379 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx2P48379 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx2P48379 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx2P48379 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.41■□□□□ 0.06
Rfx2P48379 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rfx2P48379 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.4■□□□□ 0.06
Rfx2P48379 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Mir449b-201ENSMUST00000104833 80 ntBASIC15.4■□□□□ 0.06
Rfx2P48379 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfx2P48379 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.4■□□□□ 0.06
Rfx2P48379 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm16026-204ENSMUST00000162652 683 ntBASIC15.4■□□□□ 0.06
Rfx2P48379 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm24158-201ENSMUST00000175263 71 ntBASIC15.4■□□□□ 0.06
Rfx2P48379 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.4■□□□□ 0.06
Rfx2P48379 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rfx2P48379 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.4■□□□□ 0.06
Rfx2P48379 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.4■□□□□ 0.06
Rfx2P48379 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx2P48379 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfx2P48379 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.39■□□□□ 0.05
Rfx2P48379 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rfx2P48379 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfx2P48379 Gm25287-201ENSMUST00000103846 110 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Gm22918-201ENSMUST00000103855 110 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfx2P48379 Gm14057-201ENSMUST00000120631 482 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Gm10253-201ENSMUST00000194270 940 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Gm7774-201ENSMUST00000200064 533 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx2P48379 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfx2P48379 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Rfx2P48379 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.39■□□□□ 0.05
Rfx2P48379 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx2P48379 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rfx2P48379 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Rfx2P48379 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Rfx2P48379 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rfx2P48379 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rfx2P48379 Gm22065-201ENSMUST00000103753 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm22066-201ENSMUST00000103761 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm24932-201ENSMUST00000103763 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm24115-201ENSMUST00000103799 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm22190-201ENSMUST00000103827 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm22191-201ENSMUST00000103831 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm24721-201ENSMUST00000103849 110 ntBASIC15.38■□□□□ 0.05
Rfx2P48379 Gm28018-201ENSMUST00000103869 110 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms