Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.25□□□□□ -0.13
TfamP40630 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
TfamP40630 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.25□□□□□ -0.13
TfamP40630 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TfamP40630 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
TfamP40630 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TfamP40630 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TfamP40630 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.24□□□□□ -0.13
TfamP40630 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
TfamP40630 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Gm12008-201ENSMUST00000117791 755 ntBASIC14.24□□□□□ -0.13
TfamP40630 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.24□□□□□ -0.13
TfamP40630 Gm23547-201ENSMUST00000158210 271 ntBASIC14.24□□□□□ -0.13
TfamP40630 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TfamP40630 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TfamP40630 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TfamP40630 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TfamP40630 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TfamP40630 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TfamP40630 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TfamP40630 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TfamP40630 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.23□□□□□ -0.13
TfamP40630 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TfamP40630 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.23□□□□□ -0.13
TfamP40630 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TfamP40630 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TfamP40630 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.22□□□□□ -0.13
TfamP40630 Gm13036-201ENSMUST00000117799 748 ntBASIC14.22□□□□□ -0.13
TfamP40630 Gm13884-201ENSMUST00000118103 829 ntBASIC14.22□□□□□ -0.13
TfamP40630 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Gm28659-201ENSMUST00000188013 759 ntBASIC14.22□□□□□ -0.13
TfamP40630 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.22□□□□□ -0.13
TfamP40630 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TfamP40630 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TfamP40630 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TfamP40630 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
TfamP40630 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TfamP40630 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms