Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Fen1P39749 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Fen1P39749 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.82□□□□□ -0.04
Fen1P39749 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.82□□□□□ -0.04
Fen1P39749 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.82□□□□□ -0.04
Fen1P39749 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Fen1P39749 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Fen1P39749 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Fen1P39749 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.81□□□□□ -0.04
Fen1P39749 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
Fen1P39749 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.81□□□□□ -0.04
Fen1P39749 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Fen1P39749 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Fen1P39749 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fen1P39749 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.8□□□□□ -0.04
Fen1P39749 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Fen1P39749 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.8□□□□□ -0.04
Fen1P39749 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.8□□□□□ -0.04
Fen1P39749 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Fen1P39749 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Fen1P39749 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fen1P39749 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Fen1P39749 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.79□□□□□ -0.04
Fen1P39749 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.79□□□□□ -0.04
Fen1P39749 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.79□□□□□ -0.04
Fen1P39749 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.79□□□□□ -0.04
Fen1P39749 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.79□□□□□ -0.04
Fen1P39749 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Fen1P39749 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.79□□□□□ -0.04
Fen1P39749 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Fen1P39749 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.79□□□□□ -0.04
Fen1P39749 Gm8655-201ENSMUST00000221159 852 ntBASIC14.79□□□□□ -0.04
Fen1P39749 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.79□□□□□ -0.04
Fen1P39749 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fen1P39749 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms