Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Mir5132-201ENSMUST00000175166 71 ntBASIC19.13■□□□□ 0.65
Col18a1P39061 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.13■□□□□ 0.65
Col18a1P39061 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col18a1P39061 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Col18a1P39061 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Col18a1P39061 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col18a1P39061 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.12■□□□□ 0.65
Col18a1P39061 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC19.12■□□□□ 0.65
Col18a1P39061 Gm2383-201ENSMUST00000181461 807 ntBASIC19.12■□□□□ 0.65
Col18a1P39061 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 CT573034.1-201ENSMUST00000222983 313 ntBASIC19.12■□□□□ 0.65
Col18a1P39061 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Col18a1P39061 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col18a1P39061 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Col18a1P39061 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.12■□□□□ 0.65
Col18a1P39061 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Col18a1P39061 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm12241-201ENSMUST00000118330 726 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm44207-201ENSMUST00000204568 1424 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC19.11■□□□□ 0.65
Col18a1P39061 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm8927-201ENSMUST00000181978 981 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm5069-202ENSMUST00000192714 1011 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Col18a1P39061 Gm3222-201ENSMUST00000071282 990 ntBASIC19.11■□□□□ 0.65
Col18a1P39061 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Col18a1P39061 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col18a1P39061 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC19.1■□□□□ 0.65
Col18a1P39061 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Col18a1P39061 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Gm12997-201ENSMUST00000120207 640 ntBASIC19.1■□□□□ 0.65
Col18a1P39061 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Col18a1P39061 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Col18a1P39061 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC19.1■□□□□ 0.65
Col18a1P39061 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC19.1■□□□□ 0.65
Col18a1P39061 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC19.1■□□□□ 0.65
Col18a1P39061 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Col18a1P39061 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Col18a1P39061 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Col18a1P39061 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col18a1P39061 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Gm9368-201ENSMUST00000219348 831 ntBASIC19.09■□□□□ 0.65
Col18a1P39061 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.09■□□□□ 0.65
Col18a1P39061 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col18a1P39061 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms