Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
Cdh4P39038 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdh4P39038 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh4P39038 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdh4P39038 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cdh4P39038 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh4P39038 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh4P39038 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cdh4P39038 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cdh4P39038 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Cdh4P39038 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh4P39038 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdh4P39038 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdh4P39038 Rprl2-201ENSMUST00000157150 290 ntBASIC14.06□□□□□ -0.16
Cdh4P39038 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.06□□□□□ -0.16
Cdh4P39038 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.06□□□□□ -0.16
Cdh4P39038 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Cdh4P39038 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh4P39038 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.06□□□□□ -0.16
Cdh4P39038 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdh4P39038 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cdh4P39038 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdh4P39038 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh4P39038 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Gm11745-201ENSMUST00000121669 448 ntBASIC14.05□□□□□ -0.16
Cdh4P39038 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.05□□□□□ -0.16
Cdh4P39038 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh4P39038 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdh4P39038 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.05□□□□□ -0.16
Cdh4P39038 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Gm5867-201ENSMUST00000063197 592 ntBASIC14.05□□□□□ -0.16
Cdh4P39038 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdh4P39038 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.05□□□□□ -0.16
Cdh4P39038 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh4P39038 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cdh4P39038 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Cdh4P39038 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Gm6973-201ENSMUST00000117080 721 ntBASIC14.04□□□□□ -0.16
Cdh4P39038 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh4P39038 Gm11543-201ENSMUST00000120758 370 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms