Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.06■□□□□ 0
Mmp13P33435 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Mmp13P33435 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.06■□□□□ 0
Mmp13P33435 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.05■□□□□ 0
Mmp13P33435 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Mmp13P33435 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Mmp13P33435 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Mmp13P33435 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Mmp13P33435 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Mmp13P33435 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Mmp13P33435 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Mmp13P33435 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Mmp13P33435 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.05■□□□□ 0
Mmp13P33435 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.05■□□□□ -0
Mmp13P33435 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.05■□□□□ -0
Mmp13P33435 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.05■□□□□ -0
Mmp13P33435 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
Mmp13P33435 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.05■□□□□ -0
Mmp13P33435 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.05■□□□□ -0
Mmp13P33435 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Mmp13P33435 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Mmp13P33435 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Gm18489-201ENSMUST00000172565 551 ntBASIC15.04■□□□□ -0
Mmp13P33435 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Gm27525-201ENSMUST00000184465 107 ntBASIC15.04■□□□□ -0
Mmp13P33435 Gm9682-201ENSMUST00000197505 556 ntBASIC15.04■□□□□ -0
Mmp13P33435 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Mmp13P33435 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Mmp13P33435 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Mmp13P33435 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Mmp13P33435 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.03■□□□□ -0
Mmp13P33435 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.03■□□□□ -0
Mmp13P33435 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
Mmp13P33435 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.03■□□□□ -0
Mmp13P33435 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.03■□□□□ -0
Mmp13P33435 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Gm8000-201ENSMUST00000188378 592 ntBASIC15.03■□□□□ -0
Mmp13P33435 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.03■□□□□ -0
Mmp13P33435 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.03■□□□□ -0
Mmp13P33435 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Mmp13P33435 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms