Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.6□□□□□ -0.23
Nedd8P29595 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.6□□□□□ -0.23
Nedd8P29595 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.6□□□□□ -0.23
Nedd8P29595 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.59□□□□□ -0.23
Nedd8P29595 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.59□□□□□ -0.23
Nedd8P29595 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nedd8P29595 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Nedd8P29595 Gm715-201ENSMUST00000117865 831 ntBASIC13.59□□□□□ -0.23
Nedd8P29595 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.59□□□□□ -0.23
Nedd8P29595 Gm8495-201ENSMUST00000188740 694 ntBASIC13.59□□□□□ -0.23
Nedd8P29595 Gm21814-202ENSMUST00000203277 873 ntBASIC13.59□□□□□ -0.23
Nedd8P29595 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.59□□□□□ -0.23
Nedd8P29595 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.59□□□□□ -0.23
Nedd8P29595 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nedd8P29595 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nedd8P29595 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Nedd8P29595 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nedd8P29595 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nedd8P29595 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.23
Nedd8P29595 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nedd8P29595 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nedd8P29595 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.58□□□□□ -0.24
Nedd8P29595 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Mir1668-201ENSMUST00000184114 107 ntBASIC13.58□□□□□ -0.24
Nedd8P29595 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.58□□□□□ -0.24
Nedd8P29595 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.58□□□□□ -0.24
Nedd8P29595 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Gm9987-201ENSMUST00000069768 567 ntBASIC13.58□□□□□ -0.24
Nedd8P29595 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nedd8P29595 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nedd8P29595 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nedd8P29595 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.58□□□□□ -0.24
Nedd8P29595 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nedd8P29595 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nedd8P29595 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.57□□□□□ -0.24
Nedd8P29595 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.57□□□□□ -0.24
Nedd8P29595 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Gm25406-201ENSMUST00000157599 105 ntBASIC13.57□□□□□ -0.24
Nedd8P29595 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Nedd8P29595 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nedd8P29595 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms