Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.64□□□□□ -0.23
BgnP28653 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.64□□□□□ -0.23
BgnP28653 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.64□□□□□ -0.23
BgnP28653 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.64□□□□□ -0.23
BgnP28653 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.64□□□□□ -0.23
BgnP28653 Gm18032-201ENSMUST00000222541 538 ntBASIC13.64□□□□□ -0.23
BgnP28653 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.64□□□□□ -0.23
BgnP28653 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
BgnP28653 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
BgnP28653 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
BgnP28653 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
BgnP28653 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
BgnP28653 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.64□□□□□ -0.23
BgnP28653 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.64□□□□□ -0.23
BgnP28653 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
BgnP28653 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
BgnP28653 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.63□□□□□ -0.23
BgnP28653 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.63□□□□□ -0.23
BgnP28653 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.63□□□□□ -0.23
BgnP28653 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.63□□□□□ -0.23
BgnP28653 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BgnP28653 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.63□□□□□ -0.23
BgnP28653 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BgnP28653 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.62□□□□□ -0.23
BgnP28653 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Gm10013-201ENSMUST00000106074 672 ntBASIC13.62□□□□□ -0.23
BgnP28653 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
BgnP28653 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.62□□□□□ -0.23
BgnP28653 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BgnP28653 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
BgnP28653 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
BgnP28653 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BgnP28653 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.62□□□□□ -0.23
BgnP28653 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
BgnP28653 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
BgnP28653 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.61□□□□□ -0.23
BgnP28653 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.61□□□□□ -0.23
BgnP28653 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
BgnP28653 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.61□□□□□ -0.23
BgnP28653 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.61□□□□□ -0.23
BgnP28653 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.61□□□□□ -0.23
BgnP28653 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
BgnP28653 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BgnP28653 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BgnP28653 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms