Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.11■□□□□ 0.01
Nfkb1P25799 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.11■□□□□ 0.01
Nfkb1P25799 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.1■□□□□ 0.01
Nfkb1P25799 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nfkb1P25799 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.1■□□□□ 0.01
Nfkb1P25799 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nfkb1P25799 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.09■□□□□ 0.01
Nfkb1P25799 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm5479-201ENSMUST00000160578 435 ntBASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm27321-201ENSMUST00000185021 205 ntBASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm17837-201ENSMUST00000186435 985 ntBASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm18766-201ENSMUST00000189811 808 ntBASIC15.09■□□□□ 0.01
Nfkb1P25799 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nfkb1P25799 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nfkb1P25799 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nfkb1P25799 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.08■□□□□ 0.01
Nfkb1P25799 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Nfkb1P25799 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nfkb1P25799 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nfkb1P25799 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Nfkb1P25799 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nfkb1P25799 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms