Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Gm13365-201ENSMUST00000121188 973 ntBASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Gm18057-201ENSMUST00000208220 503 ntBASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tnfrsf1bP25119 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm23935-201ENSMUST00000102303 57 ntBASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm24270-201ENSMUST00000102326 57 ntBASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm24245-201ENSMUST00000157318 57 ntBASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm5867-201ENSMUST00000063197 592 ntBASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tnfrsf1bP25119 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Gm9726-201ENSMUST00000180321 678 ntBASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Gm27920-201ENSMUST00000183953 96 ntBASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Chchd1-203ENSMUST00000224633 557 ntBASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tnfrsf1bP25119 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms