Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.72□□□□□ -0.21
Clk1P22518 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Clk1P22518 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.72□□□□□ -0.21
Clk1P22518 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.72□□□□□ -0.21
Clk1P22518 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.72□□□□□ -0.21
Clk1P22518 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clk1P22518 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clk1P22518 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.72□□□□□ -0.21
Clk1P22518 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clk1P22518 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clk1P22518 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Clk1P22518 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Celf4-206ENSMUST00000224553 1729 ntBASIC13.71□□□□□ -0.21
Clk1P22518 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Clk1P22518 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Clk1P22518 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.71□□□□□ -0.21
Clk1P22518 Gm4899-201ENSMUST00000178708 719 ntBASIC13.71□□□□□ -0.21
Clk1P22518 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Clk1P22518 Gm27628-201ENSMUST00000184911 107 ntBASIC13.71□□□□□ -0.21
Clk1P22518 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.71□□□□□ -0.21
Clk1P22518 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.71□□□□□ -0.21
Clk1P22518 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Clk1P22518 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clk1P22518 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clk1P22518 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Clk1P22518 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clk1P22518 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Clk1P22518 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.7□□□□□ -0.22
Clk1P22518 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
Clk1P22518 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clk1P22518 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clk1P22518 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.7□□□□□ -0.22
Clk1P22518 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Clk1P22518 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clk1P22518 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clk1P22518 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clk1P22518 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clk1P22518 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms