Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.12□□□□□ -0.15
BdnfP21237 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BdnfP21237 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BdnfP21237 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.11□□□□□ -0.15
BdnfP21237 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
BdnfP21237 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
BdnfP21237 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.11□□□□□ -0.15
BdnfP21237 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Gm25990-201ENSMUST00000102440 86 ntBASIC14.11□□□□□ -0.15
BdnfP21237 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.11□□□□□ -0.15
BdnfP21237 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.11□□□□□ -0.15
BdnfP21237 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.11□□□□□ -0.15
BdnfP21237 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.11□□□□□ -0.15
BdnfP21237 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
BdnfP21237 Gm6376-201ENSMUST00000209407 580 ntBASIC14.11□□□□□ -0.15
BdnfP21237 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.11□□□□□ -0.15
BdnfP21237 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
BdnfP21237 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.11□□□□□ -0.15
BdnfP21237 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.11□□□□□ -0.15
BdnfP21237 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BdnfP21237 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.1□□□□□ -0.15
BdnfP21237 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.1□□□□□ -0.15
BdnfP21237 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.1□□□□□ -0.15
BdnfP21237 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BdnfP21237 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BdnfP21237 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.1□□□□□ -0.15
BdnfP21237 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.1□□□□□ -0.15
BdnfP21237 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.1□□□□□ -0.15
BdnfP21237 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.1□□□□□ -0.15
BdnfP21237 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BdnfP21237 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BdnfP21237 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.09□□□□□ -0.15
BdnfP21237 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.09□□□□□ -0.15
BdnfP21237 Gm5682-201ENSMUST00000173402 505 ntBASIC14.09□□□□□ -0.15
BdnfP21237 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
BdnfP21237 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
BdnfP21237 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.09□□□□□ -0.15
BdnfP21237 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.09□□□□□ -0.15
BdnfP21237 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
BdnfP21237 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
BdnfP21237 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BdnfP21237 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.09□□□□□ -0.15
BdnfP21237 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BdnfP21237 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BdnfP21237 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
BdnfP21237 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
BdnfP21237 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
BdnfP21237 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms