Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Prim1P20664 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prim1P20664 Sybu-209ENSMUST00000228639 4113 ntBASIC18.66■□□□□ 0.58
Prim1P20664 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Prim1P20664 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.66■□□□□ 0.58
Prim1P20664 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.66■□□□□ 0.58
Prim1P20664 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Gm2423-201ENSMUST00000074863 733 ntBASIC18.66■□□□□ 0.58
Prim1P20664 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Prim1P20664 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.66■□□□□ 0.58
Prim1P20664 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.66■□□□□ 0.58
Prim1P20664 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prim1P20664 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.66■□□□□ 0.58
Prim1P20664 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prim1P20664 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prim1P20664 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Gm14767-201ENSMUST00000121559 586 ntBASIC18.65■□□□□ 0.58
Prim1P20664 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.65■□□□□ 0.58
Prim1P20664 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Prim1P20664 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.65■□□□□ 0.58
Prim1P20664 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Prim1P20664 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prim1P20664 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.65■□□□□ 0.58
Prim1P20664 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.65■□□□□ 0.58
Prim1P20664 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Prim1P20664 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.65■□□□□ 0.58
Prim1P20664 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prim1P20664 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.65■□□□□ 0.58
Prim1P20664 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prim1P20664 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prim1P20664 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prim1P20664 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Prim1P20664 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Prim1P20664 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Prim1P20664 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Gm6222-201ENSMUST00000120787 396 ntBASIC18.64■□□□□ 0.57
Prim1P20664 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.64■□□□□ 0.57
Prim1P20664 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.64■□□□□ 0.57
Prim1P20664 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.64■□□□□ 0.57
Prim1P20664 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Mir8102-201ENSMUST00000184148 139 ntBASIC18.64■□□□□ 0.57
Prim1P20664 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.64■□□□□ 0.57
Prim1P20664 Gm16476-201ENSMUST00000221544 139 ntBASIC18.64■□□□□ 0.57
Prim1P20664 Dupd1-202ENSMUST00000224735 548 ntBASIC18.64■□□□□ 0.57
Prim1P20664 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.64■□□□□ 0.57
Prim1P20664 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prim1P20664 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prim1P20664 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prim1P20664 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prim1P20664 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prim1P20664 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prim1P20664 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prim1P20664 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Prim1P20664 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prim1P20664 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prim1P20664 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Prim1P20664 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.63■□□□□ 0.57
Prim1P20664 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prim1P20664 Gm27437-201ENSMUST00000183429 107 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms