Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm15358-201ENSMUST00000119249 520 ntBASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gm27301-201ENSMUST00000184012 127 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gm43125-201ENSMUST00000201724 730 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gm45612-201ENSMUST00000211320 160 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf9P20334 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf9P20334 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms