Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.96□□□□□ -0.17
Msx1P13297 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.96□□□□□ -0.17
Msx1P13297 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.96□□□□□ -0.17
Msx1P13297 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Msx1P13297 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.96□□□□□ -0.17
Msx1P13297 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.96□□□□□ -0.17
Msx1P13297 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.96□□□□□ -0.17
Msx1P13297 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Msx1P13297 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.96□□□□□ -0.17
Msx1P13297 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.96□□□□□ -0.17
Msx1P13297 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.96□□□□□ -0.17
Msx1P13297 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Msx1P13297 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Msx1P13297 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Msx1P13297 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Msx1P13297 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Msx1P13297 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Msx1P13297 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Msx1P13297 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.95□□□□□ -0.18
Msx1P13297 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Msx1P13297 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Msx1P13297 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Msx1P13297 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Msx1P13297 Gm9385-201ENSMUST00000117563 472 ntBASIC13.95□□□□□ -0.18
Msx1P13297 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.95□□□□□ -0.18
Msx1P13297 Gm25116-201ENSMUST00000157191 122 ntBASIC13.95□□□□□ -0.18
Msx1P13297 Gm7430-201ENSMUST00000193824 1144 ntBASIC13.95□□□□□ -0.18
Msx1P13297 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Msx1P13297 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Msx1P13297 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Msx1P13297 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Msx1P13297 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Msx1P13297 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.95□□□□□ -0.18
Msx1P13297 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Msx1P13297 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Msx1P13297 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Gm16198-201ENSMUST00000118766 670 ntBASIC13.94□□□□□ -0.18
Msx1P13297 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.94□□□□□ -0.18
Msx1P13297 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Msx1P13297 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Gm18363-201ENSMUST00000221671 730 ntBASIC13.94□□□□□ -0.18
Msx1P13297 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Msx1P13297 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.94□□□□□ -0.18
Msx1P13297 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Msx1P13297 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Msx1P13297 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Msx1P13297 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms