Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lire1P11260 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lire1P11260 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Lire1P11260 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lire1P11260 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lire1P11260 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.96□□□□□ -0.17
Lire1P11260 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.96□□□□□ -0.17
Lire1P11260 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Gm23935-201ENSMUST00000102303 57 ntBASIC13.96□□□□□ -0.17
Lire1P11260 Gm24270-201ENSMUST00000102326 57 ntBASIC13.96□□□□□ -0.17
Lire1P11260 Gm11764-201ENSMUST00000120221 623 ntBASIC13.96□□□□□ -0.17
Lire1P11260 Gm24245-201ENSMUST00000157318 57 ntBASIC13.96□□□□□ -0.17
Lire1P11260 Gm27628-201ENSMUST00000184911 107 ntBASIC13.96□□□□□ -0.17
Lire1P11260 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.96□□□□□ -0.17
Lire1P11260 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lire1P11260 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lire1P11260 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lire1P11260 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lire1P11260 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Lire1P11260 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.96□□□□□ -0.18
Lire1P11260 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.96□□□□□ -0.18
Lire1P11260 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lire1P11260 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lire1P11260 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Lire1P11260 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lire1P11260 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.95□□□□□ -0.18
Lire1P11260 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.95□□□□□ -0.18
Lire1P11260 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.95□□□□□ -0.18
Lire1P11260 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Mir8117-201ENSMUST00000184773 107 ntBASIC13.95□□□□□ -0.18
Lire1P11260 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.95□□□□□ -0.18
Lire1P11260 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.95□□□□□ -0.18
Lire1P11260 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lire1P11260 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.95□□□□□ -0.18
Lire1P11260 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lire1P11260 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lire1P11260 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lire1P11260 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.94□□□□□ -0.18
Lire1P11260 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lire1P11260 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.94□□□□□ -0.18
Lire1P11260 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
Lire1P11260 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
Lire1P11260 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lire1P11260 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Lire1P11260 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lire1P11260 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms