Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ly6c1P0CW02 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ly6c1P0CW02 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ly6c1P0CW02 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ly6c1P0CW02 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ly6c1P0CW02 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Carlr-201ENSMUST00000181515 2574 ntBASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Gm28745-201ENSMUST00000190069 305 ntBASIC12.29□□□□□ -0.44
Ly6c1P0CW02 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ly6c1P0CW02 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm8749-201ENSMUST00000117737 331 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm2451-201ENSMUST00000199447 999 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm10290-201ENSMUST00000200451 999 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm45696-201ENSMUST00000212088 985 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 AC124408.1-201ENSMUST00000228938 707 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm8396-201ENSMUST00000057361 823 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ly6c1P0CW02 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ly6c1P0CW02 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Gm2810-201ENSMUST00000118681 990 ntBASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Gm13366-201ENSMUST00000122198 970 ntBASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ly6c1P0CW02 Gm5479-201ENSMUST00000160578 435 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms