Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm14042-201ENSMUST00000120139 833 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm11543-201ENSMUST00000120758 370 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm45098-201ENSMUST00000207179 657 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.76□□□□□ -0.37
PtcraP0C6B2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PtcraP0C6B2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gm6973-201ENSMUST00000117080 721 ntBASIC12.75□□□□□ -0.37
PtcraP0C6B2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gm5479-201ENSMUST00000160578 435 ntBASIC12.75□□□□□ -0.37
PtcraP0C6B2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gm20553-201ENSMUST00000204205 844 ntBASIC12.75□□□□□ -0.37
PtcraP0C6B2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.75□□□□□ -0.37
PtcraP0C6B2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.75□□□□□ -0.37
PtcraP0C6B2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PtcraP0C6B2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.74□□□□□ -0.37
PtcraP0C6B2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PtcraP0C6B2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms