Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Hoxc9P09633 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.94■□□□□ 0.62
Hoxc9P09633 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.94■□□□□ 0.62
Hoxc9P09633 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.94■□□□□ 0.62
Hoxc9P09633 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hoxc9P09633 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hoxc9P09633 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxc9P09633 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Gm11478-201ENSMUST00000117851 599 ntBASIC18.93■□□□□ 0.62
Hoxc9P09633 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.93■□□□□ 0.62
Hoxc9P09633 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.93■□□□□ 0.62
Hoxc9P09633 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hoxc9P09633 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxc9P09633 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.92■□□□□ 0.62
Hoxc9P09633 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
Hoxc9P09633 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.92■□□□□ 0.62
Hoxc9P09633 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxc9P09633 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hoxc9P09633 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.91■□□□□ 0.62
Hoxc9P09633 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.91■□□□□ 0.62
Hoxc9P09633 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.91■□□□□ 0.62
Hoxc9P09633 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.91■□□□□ 0.62
Hoxc9P09633 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Hoxc9P09633 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxc9P09633 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.9■□□□□ 0.62
Hoxc9P09633 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hoxc9P09633 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxc9P09633 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms