Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Gm9797-201ENSMUST00000052902 613 ntBASIC15.17■□□□□ 0.02
PrnpP04925 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PrnpP04925 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PrnpP04925 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PrnpP04925 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.16■□□□□ 0.02
PrnpP04925 Gm45384-201ENSMUST00000210451 277 ntBASIC15.16■□□□□ 0.02
PrnpP04925 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.16■□□□□ 0.02
PrnpP04925 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.16■□□□□ 0.02
PrnpP04925 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.16■□□□□ 0.02
PrnpP04925 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.16■□□□□ 0.02
PrnpP04925 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.16■□□□□ 0.02
PrnpP04925 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.16■□□□□ 0.02
PrnpP04925 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PrnpP04925 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PrnpP04925 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.15■□□□□ 0.02
PrnpP04925 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PrnpP04925 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.15■□□□□ 0.02
PrnpP04925 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PrnpP04925 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.15■□□□□ 0.02
PrnpP04925 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PrnpP04925 Gm6916-202ENSMUST00000205523 195 ntBASIC15.15■□□□□ 0.02
PrnpP04925 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PrnpP04925 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.15■□□□□ 0.02
PrnpP04925 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.15■□□□□ 0.02
PrnpP04925 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PrnpP04925 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 BC001981-202ENSMUST00000191393 1545 ntBASIC15.15■□□□□ 0.02
PrnpP04925 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PrnpP04925 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PrnpP04925 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.14■□□□□ 0.01
PrnpP04925 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Gm12585-201ENSMUST00000117307 290 ntBASIC15.14■□□□□ 0.01
PrnpP04925 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.14■□□□□ 0.01
PrnpP04925 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.14■□□□□ 0.01
PrnpP04925 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PrnpP04925 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.14■□□□□ 0.01
PrnpP04925 Gm10766-202ENSMUST00000194123 606 ntBASIC15.14■□□□□ 0.01
PrnpP04925 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.14■□□□□ 0.01
PrnpP04925 Gm9908-201ENSMUST00000211534 448 ntBASIC15.14■□□□□ 0.01
PrnpP04925 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.14■□□□□ 0.01
PrnpP04925 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PrnpP04925 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms