Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Gm25406-201ENSMUST00000157599 105 ntBASIC12.92□□□□□ -0.34
P04224 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.92□□□□□ -0.34
P04224 Gm45328-201ENSMUST00000210942 917 ntBASIC12.92□□□□□ -0.34
P04224 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
P04224 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.92□□□□□ -0.34
P04224 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.92□□□□□ -0.34
P04224 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
P04224 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P04224 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P04224 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
P04224 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
P04224 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.91□□□□□ -0.34
P04224 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
P04224 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.91□□□□□ -0.34
P04224 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.91□□□□□ -0.34
P04224 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P04224 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
P04224 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.9□□□□□ -0.34
P04224 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
P04224 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.9□□□□□ -0.34
P04224 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
P04224 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.9□□□□□ -0.34
P04224 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P04224 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
P04224 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
P04224 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
P04224 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
P04224 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
P04224 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
P04224 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
P04224 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04224 Matn2-206ENSMUST00000228570 2798 ntBASIC12.89□□□□□ -0.35
P04224 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms