Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.1□□□□□ -0.63
P01739 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.1□□□□□ -0.63
P01739 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
P01739 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.1□□□□□ -0.63
P01739 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P01739 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.1□□□□□ -0.63
P01739 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.1□□□□□ -0.63
P01739 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.1□□□□□ -0.63
P01739 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
P01739 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
P01739 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Gm13036-201ENSMUST00000117799 748 ntBASIC11.1□□□□□ -0.63
P01739 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P01739 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.1□□□□□ -0.63
P01739 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.1□□□□□ -0.63
P01739 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.1□□□□□ -0.63
P01739 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
P01739 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P01739 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
P01739 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P01739 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01739 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.09□□□□□ -0.63
P01739 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
P01739 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.09□□□□□ -0.63
P01739 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
P01739 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01739 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.09□□□□□ -0.63
P01739 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01739 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01739 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P01739 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
P01739 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P01739 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.08□□□□□ -0.64
P01739 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01739 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01739 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms