Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hdac3O88895 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hdac3O88895 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hdac3O88895 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.18□□□□□ -0.3
Hdac3O88895 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hdac3O88895 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hdac3O88895 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Hdac3O88895 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Hdac3O88895 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hdac3O88895 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Gm15173-201ENSMUST00000122049 433 ntBASIC13.17□□□□□ -0.3
Hdac3O88895 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.17□□□□□ -0.3
Hdac3O88895 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.17□□□□□ -0.3
Hdac3O88895 Gm27741-201ENSMUST00000185060 237 ntBASIC13.17□□□□□ -0.3
Hdac3O88895 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.17□□□□□ -0.3
Hdac3O88895 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.17□□□□□ -0.3
Hdac3O88895 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.17□□□□□ -0.3
Hdac3O88895 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hdac3O88895 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hdac3O88895 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Hdac3O88895 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hdac3O88895 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hdac3O88895 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hdac3O88895 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.16□□□□□ -0.3
Hdac3O88895 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hdac3O88895 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.16□□□□□ -0.3
Hdac3O88895 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.16□□□□□ -0.3
Hdac3O88895 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hdac3O88895 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hdac3O88895 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hdac3O88895 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms