Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.6□□□□□ -0.23
Cops4O88544 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.6□□□□□ -0.23
Cops4O88544 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.6□□□□□ -0.23
Cops4O88544 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.6□□□□□ -0.23
Cops4O88544 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops4O88544 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cops4O88544 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops4O88544 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.6□□□□□ -0.23
Cops4O88544 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cops4O88544 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cops4O88544 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Cops4O88544 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cops4O88544 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.59□□□□□ -0.23
Cops4O88544 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.59□□□□□ -0.23
Cops4O88544 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cops4O88544 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cops4O88544 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cops4O88544 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.59□□□□□ -0.23
Cops4O88544 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cops4O88544 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.59□□□□□ -0.23
Cops4O88544 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.59□□□□□ -0.23
Cops4O88544 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.59□□□□□ -0.23
Cops4O88544 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cops4O88544 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cops4O88544 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.58□□□□□ -0.23
Cops4O88544 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Cops4O88544 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cops4O88544 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cops4O88544 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.58□□□□□ -0.24
Cops4O88544 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.58□□□□□ -0.24
Cops4O88544 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.58□□□□□ -0.24
Cops4O88544 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Cops4O88544 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Gm12497-201ENSMUST00000138778 237 ntBASIC13.58□□□□□ -0.24
Cops4O88544 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.58□□□□□ -0.24
Cops4O88544 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.58□□□□□ -0.24
Cops4O88544 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cops4O88544 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cops4O88544 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cops4O88544 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cops4O88544 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.58□□□□□ -0.24
Cops4O88544 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cops4O88544 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.58□□□□□ -0.24
Cops4O88544 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.57□□□□□ -0.24
Cops4O88544 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cops4O88544 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms