Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Gm8825-201ENSMUST00000182565 998 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm4518-201ENSMUST00000182638 718 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dnmt3bO88509 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.21□□□□□ -0.13
Dnmt3bO88509 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Dnmt3bO88509 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dnmt3bO88509 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.21□□□□□ -0.14
Dnmt3bO88509 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dnmt3bO88509 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.2□□□□□ -0.14
Dnmt3bO88509 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Gm18622-201ENSMUST00000219361 595 ntBASIC14.2□□□□□ -0.14
Dnmt3bO88509 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Gm10175-201ENSMUST00000086013 645 ntBASIC14.2□□□□□ -0.14
Dnmt3bO88509 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Dnmt3bO88509 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dnmt3bO88509 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.2□□□□□ -0.14
Dnmt3bO88509 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Dnmt3bO88509 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.18□□□□□ -0.14
Dnmt3bO88509 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Gm11025-201ENSMUST00000140773 466 ntBASIC14.18□□□□□ -0.14
Dnmt3bO88509 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.18□□□□□ -0.14
Dnmt3bO88509 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Dnmt3bO88509 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms