Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm8410-201ENSMUST00000117225 605 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm25925-201ENSMUST00000158314 306 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Gm10226O88253 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm29310-201ENSMUST00000185468 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21825-201ENSMUST00000185728 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm29109-201ENSMUST00000185895 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21896-201ENSMUST00000186520 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21873-201ENSMUST00000186728 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21794-201ENSMUST00000187056 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21880-201ENSMUST00000187275 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21826-201ENSMUST00000187451 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21198-201ENSMUST00000188393 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21749-201ENSMUST00000189343 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21901-201ENSMUST00000189568 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm29424-201ENSMUST00000189716 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm28599-201ENSMUST00000189838 694 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21867-201ENSMUST00000189917 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm29269-201ENSMUST00000190087 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21722-201ENSMUST00000190153 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm28423-201ENSMUST00000190701 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21899-201ENSMUST00000190745 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21910-201ENSMUST00000191163 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21849-201ENSMUST00000191571 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm28678-201ENSMUST00000191593 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm20910-201ENSMUST00000193268 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Gm21871-201ENSMUST00000194621 696 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Gm10226O88253 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.31□□□□□ -0.6
Gm10226O88253 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm10226O88253 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm10226O88253 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm10226O88253 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Gm10226O88253 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Efs-202ENSMUST00000227037 2540 ntBASIC11.3□□□□□ -0.6
Gm10226O88253 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.3□□□□□ -0.6
Gm10226O88253 Gm25144-201ENSMUST00000179561 110 ntBASIC11.3□□□□□ -0.6
Gm10226O88253 Gm25352-201ENSMUST00000179815 110 ntBASIC11.3□□□□□ -0.6
Gm10226O88253 Gm28630-201ENSMUST00000187806 498 ntBASIC11.3□□□□□ -0.6
Gm10226O88253 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.3□□□□□ -0.6
Gm10226O88253 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.3□□□□□ -0.6
Gm10226O88253 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.3□□□□□ -0.6
Gm10226O88253 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.3□□□□□ -0.6
Gm10226O88253 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.3□□□□□ -0.6
Gm10226O88253 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gm10226O88253 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm10226O88253 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms