Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Sybu-209ENSMUST00000228639 4113 ntBASIC16.27■□□□□ 0.2
Atp9aO70228 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Gm5566-201ENSMUST00000116118 459 ntBASIC16.27■□□□□ 0.2
Atp9aO70228 Gm13453-201ENSMUST00000118708 357 ntBASIC16.27■□□□□ 0.2
Atp9aO70228 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp9aO70228 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp9aO70228 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.27■□□□□ 0.2
Atp9aO70228 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atp9aO70228 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.27■□□□□ 0.19
Atp9aO70228 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atp9aO70228 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.26■□□□□ 0.19
Atp9aO70228 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Atp9aO70228 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Gm27989-201ENSMUST00000184721 107 ntBASIC16.26■□□□□ 0.19
Atp9aO70228 Gm27321-201ENSMUST00000185021 205 ntBASIC16.26■□□□□ 0.19
Atp9aO70228 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Atp9aO70228 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atp9aO70228 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Atp9aO70228 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.26■□□□□ 0.19
Atp9aO70228 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atp9aO70228 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atp9aO70228 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atp9aO70228 Efs-202ENSMUST00000227037 2540 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Atp9aO70228 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Atp9aO70228 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.25■□□□□ 0.19
Atp9aO70228 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm9719-201ENSMUST00000162765 543 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm25144-201ENSMUST00000179561 110 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm25352-201ENSMUST00000179815 110 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Atp9aO70228 Gm29310-201ENSMUST00000185468 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21825-201ENSMUST00000185728 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm29109-201ENSMUST00000185895 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21896-201ENSMUST00000186520 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21873-201ENSMUST00000186728 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21794-201ENSMUST00000187056 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21880-201ENSMUST00000187275 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21826-201ENSMUST00000187451 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21198-201ENSMUST00000188393 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21749-201ENSMUST00000189343 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21901-201ENSMUST00000189568 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm29424-201ENSMUST00000189716 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm28599-201ENSMUST00000189838 694 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21867-201ENSMUST00000189917 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm29269-201ENSMUST00000190087 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21722-201ENSMUST00000190153 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm28423-201ENSMUST00000190701 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21899-201ENSMUST00000190745 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21910-201ENSMUST00000191163 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21849-201ENSMUST00000191571 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm28678-201ENSMUST00000191593 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Gm20910-201ENSMUST00000193268 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm21871-201ENSMUST00000194621 696 ntBASIC16.25■□□□□ 0.19
Atp9aO70228 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Atp9aO70228 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atp9aO70228 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms