Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Gm43767-201ENSMUST00000198933 381 ntBASIC12.19□□□□□ -0.46
SncaO55042 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
SncaO55042 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.19□□□□□ -0.46
SncaO55042 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SncaO55042 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SncaO55042 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.18□□□□□ -0.46
SncaO55042 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SncaO55042 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SncaO55042 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Gm11780-201ENSMUST00000136880 516 ntBASIC12.18□□□□□ -0.46
SncaO55042 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.18□□□□□ -0.46
SncaO55042 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
SncaO55042 Gm18489-201ENSMUST00000172565 551 ntBASIC12.18□□□□□ -0.46
SncaO55042 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.18□□□□□ -0.46
SncaO55042 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.18□□□□□ -0.46
SncaO55042 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.18□□□□□ -0.46
SncaO55042 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.18□□□□□ -0.46
SncaO55042 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SncaO55042 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.17□□□□□ -0.46
SncaO55042 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.17□□□□□ -0.46
SncaO55042 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SncaO55042 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
SncaO55042 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SncaO55042 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.17□□□□□ -0.46
SncaO55042 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SncaO55042 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SncaO55042 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SncaO55042 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SncaO55042 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.16□□□□□ -0.46
SncaO55042 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.16□□□□□ -0.46
SncaO55042 Gm7787-201ENSMUST00000216858 688 ntBASIC12.16□□□□□ -0.46
SncaO55042 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms