Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm5354-201ENSMUST00000182417 973 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm15823-201ENSMUST00000064305 670 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Cacna1bO55017 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cacna1bO55017 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cacna1bO55017 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.14□□□□□ -0.15
Cacna1bO55017 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.14□□□□□ -0.15
Cacna1bO55017 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.14□□□□□ -0.15
Cacna1bO55017 Gm37424-201ENSMUST00000191727 561 ntBASIC14.14□□□□□ -0.15
Cacna1bO55017 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Gm46209-201ENSMUST00000217912 553 ntBASIC14.14□□□□□ -0.15
Cacna1bO55017 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.14□□□□□ -0.15
Cacna1bO55017 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cacna1bO55017 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1bO55017 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1bO55017 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.13□□□□□ -0.15
Cacna1bO55017 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.13□□□□□ -0.15
Cacna1bO55017 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Mir125a-201ENSMUST00000083545 68 ntBASIC14.13□□□□□ -0.15
Cacna1bO55017 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cacna1bO55017 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.13□□□□□ -0.15
Cacna1bO55017 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cacna1bO55017 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1bO55017 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cacna1bO55017 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms