Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.32■□□□□ 0.04
Per2O54943 Thap2-203ENSMUST00000218989 527 ntBASIC15.32■□□□□ 0.04
Per2O54943 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.32■□□□□ 0.04
Per2O54943 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Per2O54943 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Per2O54943 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Per2O54943 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Per2O54943 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Per2O54943 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Per2O54943 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Per2O54943 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Gm13464-201ENSMUST00000119418 935 ntBASIC15.31■□□□□ 0.04
Per2O54943 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.31■□□□□ 0.04
Per2O54943 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Per2O54943 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.31■□□□□ 0.04
Per2O54943 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.31■□□□□ 0.04
Per2O54943 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.31■□□□□ 0.04
Per2O54943 Psmb5-202ENSMUST00000227257 622 ntBASIC15.31■□□□□ 0.04
Per2O54943 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.31■□□□□ 0.04
Per2O54943 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Per2O54943 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Per2O54943 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Per2O54943 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.3■□□□□ 0.04
Per2O54943 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Gm23547-201ENSMUST00000158210 271 ntBASIC15.3■□□□□ 0.04
Per2O54943 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.3■□□□□ 0.04
Per2O54943 Gm9726-201ENSMUST00000180321 678 ntBASIC15.3■□□□□ 0.04
Per2O54943 Gm5177-201ENSMUST00000183092 997 ntBASIC15.3■□□□□ 0.04
Per2O54943 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.3■□□□□ 0.04
Per2O54943 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.3■□□□□ 0.04
Per2O54943 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.3■□□□□ 0.04
Per2O54943 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Per2O54943 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Per2O54943 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Per2O54943 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.29■□□□□ 0.04
Per2O54943 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Per2O54943 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Per2O54943 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Per2O54943 Gm8749-201ENSMUST00000117737 331 ntBASIC15.29■□□□□ 0.04
Per2O54943 Gm16198-201ENSMUST00000118766 670 ntBASIC15.29■□□□□ 0.04
Per2O54943 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.29■□□□□ 0.04
Per2O54943 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Per2O54943 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Per2O54943 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms