Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.02□□□□□ -0.17
Clk3O35492 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Clk3O35492 Grk6-207ENSMUST00000225925 2769 ntBASIC14.02□□□□□ -0.17
Clk3O35492 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Clk3O35492 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clk3O35492 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.01□□□□□ -0.17
Clk3O35492 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clk3O35492 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.01□□□□□ -0.17
Clk3O35492 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.01□□□□□ -0.17
Clk3O35492 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.01□□□□□ -0.17
Clk3O35492 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.01□□□□□ -0.17
Clk3O35492 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clk3O35492 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Clk3O35492 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk3O35492 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14□□□□□ -0.17
Clk3O35492 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14□□□□□ -0.17
Clk3O35492 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Gm23547-201ENSMUST00000158210 271 ntBASIC14□□□□□ -0.17
Clk3O35492 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Gm9682-201ENSMUST00000197505 556 ntBASIC14□□□□□ -0.17
Clk3O35492 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk3O35492 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14□□□□□ -0.17
Clk3O35492 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk3O35492 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.99□□□□□ -0.17
Clk3O35492 Mir5126-201ENSMUST00000175513 77 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms