Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx4O35137 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx4O35137 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx4O35137 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Gm7284-201ENSMUST00000131667 944 ntBASIC13.11□□□□□ -0.31
Alx4O35137 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.11□□□□□ -0.31
Alx4O35137 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.11□□□□□ -0.31
Alx4O35137 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.11□□□□□ -0.31
Alx4O35137 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx4O35137 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx4O35137 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.1□□□□□ -0.31
Alx4O35137 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.1□□□□□ -0.31
Alx4O35137 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.1□□□□□ -0.31
Alx4O35137 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.1□□□□□ -0.31
Alx4O35137 Gm6089-201ENSMUST00000197666 938 ntBASIC13.1□□□□□ -0.31
Alx4O35137 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Alx4O35137 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Alx4O35137 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx4O35137 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.1□□□□□ -0.31
Alx4O35137 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Alx4O35137 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.09□□□□□ -0.31
Alx4O35137 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Alx4O35137 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.09□□□□□ -0.31
Alx4O35137 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.09□□□□□ -0.31
Alx4O35137 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.09□□□□□ -0.31
Alx4O35137 Gm33142-201ENSMUST00000193913 867 ntBASIC13.09□□□□□ -0.31
Alx4O35137 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.09□□□□□ -0.31
Alx4O35137 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Gm7787-201ENSMUST00000216858 688 ntBASIC13.09□□□□□ -0.31
Alx4O35137 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.09□□□□□ -0.31
Alx4O35137 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Alx4O35137 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms