Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.5■□□□□ 0.39
Hdac1O09106 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hdac1O09106 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.49■□□□□ 0.39
Hdac1O09106 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.49■□□□□ 0.39
Hdac1O09106 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hdac1O09106 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.49■□□□□ 0.39
Hdac1O09106 Gm2451-201ENSMUST00000199447 999 ntBASIC17.49■□□□□ 0.39
Hdac1O09106 Gm10290-201ENSMUST00000200451 999 ntBASIC17.49■□□□□ 0.39
Hdac1O09106 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.49■□□□□ 0.39
Hdac1O09106 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
Hdac1O09106 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.49■□□□□ 0.39
Hdac1O09106 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.49■□□□□ 0.39
Hdac1O09106 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.49■□□□□ 0.39
Hdac1O09106 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hdac1O09106 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.48■□□□□ 0.39
Hdac1O09106 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.48■□□□□ 0.39
Hdac1O09106 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
Hdac1O09106 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Gm27459-201ENSMUST00000184860 107 ntBASIC17.48■□□□□ 0.39
Hdac1O09106 Gm6550-201ENSMUST00000187574 993 ntBASIC17.48■□□□□ 0.39
Hdac1O09106 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hdac1O09106 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.48■□□□□ 0.39
Hdac1O09106 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hdac1O09106 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.47■□□□□ 0.39
Hdac1O09106 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.47■□□□□ 0.39
Hdac1O09106 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.47■□□□□ 0.39
Hdac1O09106 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.47■□□□□ 0.39
Hdac1O09106 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.47■□□□□ 0.39
Hdac1O09106 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac1O09106 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hdac1O09106 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac1O09106 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms