Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ClockO08785 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ClockO08785 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ClockO08785 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 AA414768-201ENSMUST00000121924 1257 ntBASIC13.98□□□□□ -0.17
ClockO08785 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.98□□□□□ -0.17
ClockO08785 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.98□□□□□ -0.17
ClockO08785 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ClockO08785 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
ClockO08785 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
ClockO08785 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ClockO08785 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ClockO08785 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.97□□□□□ -0.17
ClockO08785 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ClockO08785 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ClockO08785 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ClockO08785 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Gm15794-201ENSMUST00000120182 631 ntBASIC13.97□□□□□ -0.17
ClockO08785 Gm13836-201ENSMUST00000121159 501 ntBASIC13.97□□□□□ -0.17
ClockO08785 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.97□□□□□ -0.17
ClockO08785 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
ClockO08785 Gm44454-201ENSMUST00000198541 138 ntBASIC13.97□□□□□ -0.17
ClockO08785 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ClockO08785 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ClockO08785 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.97□□□□□ -0.17
ClockO08785 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ClockO08785 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
ClockO08785 Rprl3-201ENSMUST00000157400 290 ntBASIC13.96□□□□□ -0.17
ClockO08785 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.96□□□□□ -0.17
ClockO08785 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ClockO08785 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ClockO08785 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ClockO08785 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
ClockO08785 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ClockO08785 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.96□□□□□ -0.18
ClockO08785 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClockO08785 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClockO08785 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClockO08785 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ClockO08785 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClockO08785 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.95□□□□□ -0.18
ClockO08785 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ClockO08785 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
ClockO08785 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ClockO08785 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms