Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm14494-201ENSMUST00000118786 435 ntBASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13d-3J3QMG8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Gm15427-201ENSMUST00000117288 531 ntBASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Rpph1-201ENSMUST00000175096 319 ntBASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13d-3J3QMG8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav13d-3J3QMG8 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms