Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcf11G3X9Z4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Gm5912-201ENSMUST00000122282 1438 ntBASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Mir7654-201ENSMUST00000185082 70 ntBASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Gm2495-201ENSMUST00000191160 466 ntBASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 AC155729.1-201ENSMUST00000227758 544 ntBASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Gm4081-201ENSMUST00000195287 1838 ntBASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcf11G3X9Z4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Gm11478-201ENSMUST00000117851 599 ntBASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Gm14127-201ENSMUST00000117906 678 ntBASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcf11G3X9Z4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Gm43433-201ENSMUST00000196573 481 ntBASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Gm17795-201ENSMUST00000214505 757 ntBASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcf11G3X9Z4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm5303-201ENSMUST00000117943 1252 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm8602-201ENSMUST00000184045 607 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Gm4971-201ENSMUST00000205991 1108 ntBASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcf11G3X9Z4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms