Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gm7561-201ENSMUST00000211203 886 ntBASIC13.79□□□□□ -0.2
Colca2F8VPY8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.79□□□□□ -0.2
Colca2F8VPY8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Colca2F8VPY8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Gm15198-201ENSMUST00000117283 177 ntBASIC13.78□□□□□ -0.2
Colca2F8VPY8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.78□□□□□ -0.2
Colca2F8VPY8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Colca2F8VPY8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Gm15429-201ENSMUST00000151268 798 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Gm8652-201ENSMUST00000181363 964 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 Gm27731-201ENSMUST00000185192 107 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 Gm18905-201ENSMUST00000205454 928 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.77□□□□□ -0.21
Colca2F8VPY8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Colca2F8VPY8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms