Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Gm45412-201ENSMUST00000210217 2275 ntBASIC8.04□□□□□ -1.12
Herc1E9PZP8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.04□□□□□ -1.12
Herc1E9PZP8 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 AC154806.6-201ENSMUST00000228192 202 ntBASIC8.04□□□□□ -1.12
Herc1E9PZP8 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC8.04□□□□□ -1.12
Herc1E9PZP8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Herc1E9PZP8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm11801-201ENSMUST00000117807 746 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm13097-201ENSMUST00000210722 397 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm45684-201ENSMUST00000210244 1571 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm16342-201ENSMUST00000124025 1025 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm6283-201ENSMUST00000182369 1000 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 AC126253.1-202ENSMUST00000226732 835 ntBASIC8.03□□□□□ -1.12
Herc1E9PZP8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC8.03□□□□□ -1.12
Herc1E9PZP8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Gm13600-201ENSMUST00000117949 744 ntBASIC8.02□□□□□ -1.12
Herc1E9PZP8 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Gm19459-201ENSMUST00000176240 835 ntBASIC8.02□□□□□ -1.12
Herc1E9PZP8 Gm28324-201ENSMUST00000187913 264 ntBASIC8.02□□□□□ -1.12
Herc1E9PZP8 AC153872.1-201ENSMUST00000199539 128 ntBASIC8.02□□□□□ -1.12
Herc1E9PZP8 Ighv1-86-201ENSMUST00000200562 353 ntBASIC8.02□□□□□ -1.12
Herc1E9PZP8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Herc1E9PZP8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Herc1E9PZP8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Herc1E9PZP8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms