Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Srp54bE9PXC0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Gm13823-201ENSMUST00000119930 345 ntBASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Gm45098-201ENSMUST00000207179 657 ntBASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Sybu-209ENSMUST00000228639 4113 ntBASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Srp54bE9PXC0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Gm13464-201ENSMUST00000119418 935 ntBASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Gm14767-201ENSMUST00000121559 586 ntBASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.46□□□□□ -0.09
Srp54bE9PXC0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Srp54bE9PXC0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Srp54bE9PXC0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Srp54bE9PXC0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Srp54bE9PXC0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Srp54bE9PXC0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Gm27437-201ENSMUST00000183429 107 ntBASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Mir7684-201ENSMUST00000183858 60 ntBASIC14.45□□□□□ -0.1
Srp54bE9PXC0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Srp54bE9PXC0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms