Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Gm38027-201ENSMUST00000192315 235 ntBASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Nkx6-2D3Z4R4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Paupar-201ENSMUST00000194826 3482 ntBASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Gm18115-201ENSMUST00000221209 621 ntBASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-2D3Z4R4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx6-2D3Z4R4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms