Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm37714-201ENSMUST00000194742 342 ntBASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm43094-201ENSMUST00000196549 921 ntBASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm42442-201ENSMUST00000197951 1133 ntBASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm10012-201ENSMUST00000078252 192 ntBASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hfm1D3Z4R1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 AC154171.1-201ENSMUST00000224610 643 ntBASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hfm1D3Z4R1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Gm27514-201ENSMUST00000183692 110 ntBASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Gm27847-201ENSMUST00000183711 107 ntBASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Gm27375-201ENSMUST00000183799 107 ntBASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Gm9299-201ENSMUST00000206392 1140 ntBASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hfm1D3Z4R1 Gm13050-201ENSMUST00000122149 1345 ntBASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Gm44608-201ENSMUST00000206827 855 ntBASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hfm1D3Z4R1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.27■□□□□ 0.84
Hfm1D3Z4R1 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms