Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pnldc1B2RXZ1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Auts2-212ENSMUST00000178555 309 ntBASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pnldc1B2RXZ1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pnldc1B2RXZ1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms