Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gm29257-201ENSMUST00000186115 639 ntBASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.9□□□□□ -0.5
Gm12887B1AVM1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Gm12887B1AVM1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Gm12887B1AVM1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Gm12887B1AVM1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Gm10499-201ENSMUST00000174094 934 ntBASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Gm12887B1AVM1 Acot6-202ENSMUST00000222921 3622 ntBASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Gm44454-201ENSMUST00000198541 138 ntBASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Gm18032-201ENSMUST00000222541 538 ntBASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Gm12887B1AVM1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms