Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Gm3436-201ENSMUST00000179930 840 ntBASIC12.38□□□□□ -0.43
Col6a4A2AX52 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Gm27892-201ENSMUST00000185017 106 ntBASIC12.38□□□□□ -0.43
Col6a4A2AX52 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.38□□□□□ -0.43
Col6a4A2AX52 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.38□□□□□ -0.43
Col6a4A2AX52 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.38□□□□□ -0.43
Col6a4A2AX52 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a4A2AX52 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm9522-201ENSMUST00000182394 926 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Mir6392-201ENSMUST00000184924 108 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm28760-201ENSMUST00000185995 736 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm29310-201ENSMUST00000185468 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21825-201ENSMUST00000185728 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm29109-201ENSMUST00000185895 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21896-201ENSMUST00000186520 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21873-201ENSMUST00000186728 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21794-201ENSMUST00000187056 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21880-201ENSMUST00000187275 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21826-201ENSMUST00000187451 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21198-201ENSMUST00000188393 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21749-201ENSMUST00000189343 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21901-201ENSMUST00000189568 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm29424-201ENSMUST00000189716 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm28599-201ENSMUST00000189838 694 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21867-201ENSMUST00000189917 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm29269-201ENSMUST00000190087 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21722-201ENSMUST00000190153 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm28423-201ENSMUST00000190701 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21899-201ENSMUST00000190745 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21910-201ENSMUST00000191163 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21849-201ENSMUST00000191571 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm28678-201ENSMUST00000191593 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm20910-201ENSMUST00000193268 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Gm21871-201ENSMUST00000194621 696 ntBASIC12.37□□□□□ -0.43
Col6a4A2AX52 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.37□□□□□ -0.43
Col6a4A2AX52 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a4A2AX52 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a4A2AX52 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms