Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Scn1aA2APX8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.34■□□□□ 0.05
Scn1aA2APX8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.34■□□□□ 0.05
Scn1aA2APX8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scn1aA2APX8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Scn1aA2APX8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Gm13453-201ENSMUST00000118708 357 ntBASIC15.33■□□□□ 0.04
Scn1aA2APX8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.33■□□□□ 0.04
Scn1aA2APX8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Gm7775-201ENSMUST00000218871 853 ntBASIC15.33■□□□□ 0.04
Scn1aA2APX8 Gm6888-201ENSMUST00000221983 706 ntBASIC15.33■□□□□ 0.04
Scn1aA2APX8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Scn1aA2APX8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Mir125a-201ENSMUST00000083545 68 ntBASIC15.32■□□□□ 0.04
Scn1aA2APX8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scn1aA2APX8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm44344-201ENSMUST00000200287 129 ntBASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Scn1aA2APX8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms