Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Gm6152-201ENSMUST00000151704 340 ntBASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Gm7292-201ENSMUST00000194706 2527 ntBASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom2A2ALU4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Gm5049-201ENSMUST00000195878 1590 ntBASIC22.67■■□□□ 1.22
Shroom2A2ALU4 Gm25927-201ENSMUST00000175058 117 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm5069-202ENSMUST00000192714 1011 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm7857-201ENSMUST00000117957 358 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm2260-201ENSMUST00000184965 657 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Gm8706-201ENSMUST00000197372 1491 ntBASIC22.66■■□□□ 1.22
Shroom2A2ALU4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Gm13297-201ENSMUST00000120205 934 ntBASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Gm13813-201ENSMUST00000120998 787 ntBASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Gm6407-201ENSMUST00000176468 549 ntBASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Gm7467-201ENSMUST00000185173 652 ntBASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 AC166997.1-201ENSMUST00000225122 572 ntBASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom2A2ALU4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms