Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-1A0N8R0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12d-1A0N8R0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms