Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm5587-201ENSMUST00000206270 674 ntBASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms