Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm13294-201ENSMUST00000121757 1330 ntBASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Carlr-201ENSMUST00000181515 2574 ntBASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms