Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm15358-201ENSMUST00000119249 520 ntBASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm10499-201ENSMUST00000174094 934 ntBASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Gm8097-201ENSMUST00000117903 829 ntBASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav13-4-dv7A0A075B6C2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav13-4-dv7A0A075B6C2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms